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The Poplar Genome, 1st ed. 2024 Compendium of Plant Genomes Series

Langue : Anglais

Coordonnateurs : Porth Ilga, Klápště Jaroslav, McKown Athena

Couverture de l’ouvrage The Poplar Genome

This book is the first comprehensive compilation of research on state?of?the-art genomics on the most advanced model tree species including genome assemblies, insights into genomic structural features and methylation patterns, whole?genome resources used for population genomics and adaptation to climate, enabled breeding vs. classical genetics and traditional breeding, comparative genomics, and elucidations on functional genomics. The latest developments in the genomics of wood formation are particularly highlighted. Altogether, the book contains over 300 pages in over 15 chapters authored by globally reputed experts in the relevant fields of this tree crop?s genomics research. This book is useful for students, teachers, and scientists in academia and governmental or private tree improvement agencies or companies interested in genetics, pathology, entomology, physiology, molecular genetics and breeding, in vitro culture and genetic engineering, land restoration, and agroforestry solutions.

Preface. Ilga Porth (Université Laval), Jaroslav Klápště (New Zealand Forest Research Institute Ltd.), Athena McKown (The University of British Columbia)

Chapter 1. Introduction: Ilga Porth (Université Laval), Jaroslav Klápště (New Zealand Forest Research Institute Ltd.), Athena McKown (The University of British Columbia)

Chapter 2. Genomics resources for functional genomics in poplars: Malcolm Campbell, Nicholas J. Provart (University of Toronto), Raju Soolanayakanahally (Agriculture and AgriFood Canada), Nathaniel Street? (Umeå Plant Science Centre) 

Chapter 3. The poplar Pangenome: Gerald Tuskan (Oak Ridge National Laboratory), Steve DiFazio (West Virginia University)

Chapter 4. Epigenomics in poplar: Katharina Brӓutigam (University of Toronto), Raju Soolanayakanahally (Agriculture and AgriFood Canada)

Chapter 5. Chromosomal rearrangements and 3D organization of the poplar genome: TBD

Chapter 6. Sex-based identity in poplars: Matthias Fladung, Niels Müller (Thünen institute), Katharina Brӓutigam (University of Toronto), Athena McKown (The University of British Columbia), Quentin Cronk (The University of British Columbia), Roosje Goessen? Ilga Porth? (Université Laval)

Chapter 7. Phylogenomics, comparative genomics, interspecific hybridization in poplar: Quentin Cronk (The University of British Columbia), Berthold Heinze, Marcela van Loo (Austrian Research Centre for Forests), Adriana SuarezGonzalez (10x Genomics; The University of British Columbia)

Chapter 8. Genomics of Chinese poplars: Jian-Feng Mao (Beijing Forestry University)

Chapter 9. Genomic landscape of adaptation in European poplars: Pӓr K Ingvarsson (Swedish University of Agricultural Sciences)

Chapter 10. Genomic landscape of adaptation in North American poplars: Athena McKown (The University of British Columbia), Nathalie Isabel (Canadian Forest Service)

Chapter 11. Poplar and the associated microbiome: Christine Martineau (Canadian Forest Service), Karelle Rheault (Université Laval), Roosje Goessen (Université Laval)

Chapter 12. Wood formation and valorization in poplar: Andrew Groover (US Forest Service), Timothy Tschaplinski (Oak Ridge National Laboratory), Ewa Mellerowicz (Umeå Plant Science Centre)

Chapter 13. Genomics of secondary metabolism in poplar: Jürgen Ehlting, Peter Constable (University of Victoria)

Chapter 14. Applied Genomics in poplar: waxes: Eliana Gonzales-Vigil (University of Toronto)

Chapter 15. Applied Genomics in poplar: isoprene emissions: Joerg-Peter Schnitzler (Helmholtz Zentrum München)

Chapter 16. Applied Genomics in poplar: genetic modifications: Charleson Poovaiah (Syracuse University), C.J. Tsai (University of Georgia)

Chapter 17. Applied Genomics in poplar: adaptation to climate change: Andreas Hamann (University of Alberta), Christian Wehenkel (Universidad Juarez del Estado de Durango)

Chapter 18. Applied Genomics in poplar: phytoremediation: Stewart Rood (University of Lethbridge), Raju Soolanayakanahally (Agriculture and AgriFood Canada), Francisco Canovas (Universidad de Malaga)

Chapter 19. Applied Genomics in poplar: innovative breeding: Jaroslav Klápště (New Zealand Forest Research Institute Ltd.), Catherine Bastien (INRA – Unité Amélioration, Génétique et Physiologie forestières), Luca Comai (UC Davis), Andrew Groover (US Forest Service), Brian Stanton (GreenWood)

Chapter 20. Applied Genomics in poplar: bioenergy: Catherine Bastien (INRA – Unité Amélioration, Génétique et Physiologie forestières), Brian Stanton (GreenWood), Gail Taylor (University of Southampton)

Chapter 21. Prospects: The Poplar Genome, a Model for Understanding Angiosperm Evolution and Supporting Tree Improvement Efforts: Ilga Porth (Université Laval), Jaroslav Klápště (New Zealand Forest Research Institute Ltd.), Athena McKown (The University of British Columbia)

Dr. Ilga Porth  is a well‐experienced research scientist with research achievements in forest tree genomics, functional genomics and genetics fields. Her research findings were published in around 80 peer‐reviewed articles and in plant sciences’ top‐ranked journals such as New Phytologist, Plant Physiology, Tree Physiology, Nature Communications, Science or Molecular Ecology. She is also the editor of The Spruce Genome with Springer. She obtained her M.Sc. in Biochemistry, and her Ph.D. in Genetics from the University of Vienna. She worked at The University of British Columbia as a Research Associate in spruce and poplar functional genomics. She is currently an Associate Professor in Functional Genomics at the Département des sciences du bois et de la forêt, Université Laval, in Québec, and a Principal Investigator at the Institut de Biologie Intégrative et des Systèmes.

 

Dr. Jaroslav Klápště has achieved expertise in quantitative genetics and statistical genomics with a focus on forest trees. He is mainly interested in exploring tree phenotypic response to changing environmental conditions by exploring genotype by environment interactions supported by genomics and enviromics. Additionally, he is interested in a dissection of the genetic architecture of complex traits through genome-wide association mapping and the prediction of unobserved phenotypes through genomics and its implementation in operational forest tree breeding programmes. His research was published in around 80 peer-reviewed articles. He graduated from the Czech University of Life Sciences in Prague with a MSc in Forestry and a PhD in Dendrology and Forest Tree Breeding. After graduation, he successfully applied for a postdoctoral fellowship at the University of British Columbia focused on statistical genomics. Currently, he is a Forest Geneticist at Scion (New Zealand Forest Research Institute), working on projects focused on implementing genomic selection in forest tree breed

Presents first-hand expert comprehensive information on the genomics of poplar

Includes the most promising genomic methods in poplar tree improvement programs

Enumerates on the genomic underpinnings of phenotypic plasticity and local adaptation in poplar

Date de parution :

Ouvrage de 370 p.

17.8x25.4 cm

Disponible chez l'éditeur (délai d'approvisionnement : 15 jours).

210,99 €

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